U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Zfp953 zinc finger protein 953 [ Mus musculus (house mouse) ]

Gene ID: 629016, updated on 27-Nov-2024

Summary

Official Symbol
Zfp953provided by MGI
Official Full Name
zinc finger protein 953provided by MGI
Primary source
MGI:MGI:3612873
See related
Ensembl:ENSMUSG00000098905 AllianceGenome:MGI:3612873
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
E130120F12Rik
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Zfp953 in Genome Data Viewer
Location:
13 B3; 13 34.54 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (67487373..67508691, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (67339309..67360572, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA F630042J09 gene Neighboring gene STARR-seq mESC enhancer starr_34898 Neighboring gene zinc finger protein 457 Neighboring gene zinc finger protein 595 Neighboring gene STARR-positive B cell enhancer ABC_E3086 Neighboring gene STARR-positive B cell enhancer ABC_E9880 Neighboring gene predicted gene 17039 Neighboring gene zinc finger protein 456 Neighboring gene STARR-positive B cell enhancer ABC_E4075 Neighboring gene zinc finger protein 429

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001038651.3NP_001033740.1  zinc finger protein 953

    See identical proteins and their annotated locations for NP_001033740.1

    Status: PROVISIONAL

    Source sequence(s)
    AC154510
    Consensus CDS
    CCDS49301.1
    UniProtKB/TrEMBL
    Q3UPV7
    Related
    ENSMUSP00000076700.8, ENSMUST00000081582.8
    Conserved Domains (5) summary
    smart00349
    Location:563
    KRAB; krueppel associated box
    COG5048
    Location:26268
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:167187
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:544
    KRAB; KRAB box
    pfam13465
    Location:207230
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    67487373..67508691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)