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Gm20753 predicted gene, 20753 [ Mus musculus (house mouse) ]

Gene ID: 626049, updated on 8-Feb-2024

Summary

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Official Symbol
Gm20753provided by MGI
Official Full Name
predicted gene, 20753provided by MGI
Primary source
MGI:MGI:5434109
See related
Ensembl:ENSMUSG00000101583 AllianceGenome:MGI:5434109
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in testis adult (RPKM 4.3) and lung adult (RPKM 0.4) See more
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Genomic context

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Location:
1; 1 E2.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (106080355..106099254, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (106152625..106171524, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E8772 Neighboring gene STARR-positive B cell enhancer ABC_E5787 Neighboring gene predicted gene 7160 Neighboring gene zinc finger, CCHC domain containing 2 Neighboring gene STARR-seq mESC enhancer starr_01847 Neighboring gene STARR-positive B cell enhancer ABC_E4340 Neighboring gene STARR-positive B cell enhancer ABC_E2556 Neighboring gene STARR-seq mESC enhancer starr_01848 Neighboring gene predicted gene, 26509 Neighboring gene STARR-seq mESC enhancer starr_01850 Neighboring gene STARR-positive B cell enhancer ABC_E9059 Neighboring gene STARR-positive B cell enhancer ABC_E2005 Neighboring gene PH domain and leucine rich repeat protein phosphatase 1 Neighboring gene STARR-positive B cell enhancer mm9_chr1:108128082-108128383 Neighboring gene STARR-positive B cell enhancer ABC_E1226 Neighboring gene STARR-positive B cell enhancer ABC_E7737 Neighboring gene STARR-positive B cell enhancer mm9_chr1:108248841-108249142 Neighboring gene STARR-positive B cell enhancer ABC_E10026 Neighboring gene STARR-positive B cell enhancer ABC_E11081 Neighboring gene predicted gene 6651

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040630.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    BC048586
    Related
    ENSMUST00000190105.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    106080355..106099254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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