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Gm6644 predicted gene 6644 [ Mus musculus (house mouse) ]

Gene ID: 626009, updated on 8-Feb-2024

Summary

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Official Symbol
Gm6644provided by MGI
Official Full Name
predicted gene 6644provided by MGI
Gene description
Akr1b3 pseudogene
Primary source
MGI:MGI:3644951
See related
AllianceGenome:MGI:3644951
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Akr1b3p; EG626009
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Genomic context

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Location:
1 C1.2; 1 28.16 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (55482854..55484222, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (55443695..55445063, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_00957 Neighboring gene basic transcription factor 3, pseudogene 17 Neighboring gene STARR-positive B cell enhancer mm9_chr1:55461214-55461515 Neighboring gene predicted gene 8531 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:55503167-55503392 Neighboring gene phospholipase C-like 1 Neighboring gene STARR-seq mESC enhancer starr_00958 Neighboring gene STARR-seq mESC enhancer starr_00959 Neighboring gene predicted gene, 39642 Neighboring gene STARR-seq mESC enhancer starr_00961 Neighboring gene STARR-seq mESC enhancer starr_00962 Neighboring gene predicted gene, 32949

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome. Mural RJ, et al. Science, 2002 May 31. PMID 12040188
  2. Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas. Watahiki A, et al. Nat Methods, 2004 Dec. PMID 15782199
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • Akr1b3 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037965.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC099696

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    55482854..55484222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_005407.2: Suppressed sequence

    Description
    NG_005407.2: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.

  2. NR_028277.1: Suppressed sequence

    Description
    NR_028277.1: This RefSeq was permanently suppressed because it was based on a sequence from a different strand.
Nucleotide Protein Strain
Heading Accession and Version

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