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Cfhr3 complement factor H-related 3 [ Mus musculus (house mouse) ]

Gene ID: 624286, updated on 8-Feb-2024

Summary

Official Symbol
Cfhr3provided by MGI
Official Full Name
complement factor H-related 3provided by MGI
Primary source
MGI:MGI:3647418
See related
AllianceGenome:MGI:3647418
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG624286
Expression
Biased expression in testis adult (RPKM 3.3), liver adult (RPKM 1.5) and 1 other tissue See more
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Genomic context

See Cfhr3 in Genome Data Viewer
Location:
1 F; 1 61.62 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (139512032..139588744, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (139584294..139661006, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene coagulation factor XIII, beta subunit Neighboring gene complement factor H-related 1 Neighboring gene STARR-seq mESC enhancer starr_02482 Neighboring gene STARR-seq mESC enhancer starr_02483 Neighboring gene STARR-seq mESC enhancer starr_02484 Neighboring gene STARR-seq mESC enhancer starr_02485 Neighboring gene predicted gene, 26271 Neighboring gene STARR-seq mESC enhancer starr_02486 Neighboring gene STARR-seq mESC enhancer starr_02487 Neighboring gene complement factor H-related 4 Neighboring gene STARR-seq mESC enhancer starr_02488

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
complement factor H-related 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001374101.1NP_001361030.1  complement factor H-related 3 isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    AL837518
    Conserved Domains (1) summary
    PHA02927
    Location:151386
    PHA02927; secreted complement-binding protein; Provisional
  2. NM_001374102.1NP_001361031.1  complement factor H-related 3 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AL837518
    Conserved Domains (1) summary
    PHA02927
    Location:23262
    PHA02927; secreted complement-binding protein; Provisional

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    139512032..139588744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)