U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Igkv12-41 immunoglobulin kappa chain variable 12-41 [ Mus musculus (house mouse) ]

Gene ID: 619960, updated on 8-Feb-2024

Summary

Official Symbol
Igkv12-41provided by MGI
Official Full Name
immunoglobulin kappa chain variable 12-41provided by MGI
Primary source
MGI:MGI:4439772
See related
Ensembl:ENSMUSG00000095007 IMGT/GENE-DB:IGKV12-41; AllianceGenome:MGI:4439772
Gene type
other
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm16848
Summary
Predicted to enable identical protein binding activity. Predicted to act upstream of or within adaptive immune response. Predicted to be part of immunoglobulin complex. Orthologous to several human genes including IGKV1-27 (immunoglobulin kappa variable 1-27). [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
6 C1; 6 31.65 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (69835404..69835868, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (69858420..69858884, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa chain complex Neighboring gene STARR-seq mESC enhancer starr_16217 Neighboring gene immunoglobulin kappa chain variable 5-40-1 Neighboring gene immunoglobulin kappa chain variable 12-42 Neighboring gene immunoglobulin kappa chain variable 5-43 Neighboring gene immunoglobulin kappa chain variable 12-40

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • Ig kappa chain V-V region K2

Gene Ontology Provided by MGI

Process Evidence Code Pubs
acts_upstream_of_or_within adaptive immune response IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within immune system process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of immunoglobulin complex IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005612.1 

    Range
    2303440..2303904 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    69835404..69835868 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)