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SNORD3P1 small nucleolar RNA, C/D box 3 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 6068, updated on 10-Oct-2023

Summary

Official Symbol
SNORD3P1provided by HGNC
Official Full Name
small nucleolar RNA, C/D box 3 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:10175
See related
Ensembl:ENSG00000200318 AllianceGenome:HGNC:10175
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U3; RNU3P1
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Genomic context

Location:
15q21.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (58760466..58760681, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (56562447..56562662, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (59052665..59052880, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 10 Neighboring gene RN7SK pseudogene 95 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9476 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:59041039-59041674 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6482 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9478 Neighboring gene ATP synthase membrane subunit g pseudogene Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr15:59062438-59063363 Neighboring gene MINDY2 divergent transcript Neighboring gene MINDY lysine 48 deubiquitinase 2 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:59125759-59126526

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • RNA, U3 small nuclear pseudogene 1
  • RNA, U3 small nucleolar pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001185.3 

    Range
    101..316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    58760466..58760681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    56562447..56562662 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)