RNVU1-2A RNA, variant U1 small nuclear 2A [Homo sapiens (human)] - Gene

Summary

Official Symbol: RNVU1-2Aprovided by HGNC
Official Full Name: RNA, variant U1 small nuclear 2Aprovided by HGNC
Primary source: HGNC:HGNC:54430
See related: Ensembl:ENSG00000278099 AllianceGenome:HGNC:54430
Gene type: snRNA
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: U1P2A; RNU1P2; vU1.2a; RNU1-12P; RNVU1.2a
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Genomic context

Location:: 1q21.1

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2023_10	current	GRCh38.p14 (GCF_000001405.40)	1	NC_000001.11 (144551779..144551943, complement)
RS_2023_10	current	T2T-CHM13v2.0 (GCF_009914755.1)	1	NC_060925.1 (143514674..143514838)
105.20220307	previous assembly	GRCh37.p13 (GCF_000001405.25)	1 (PATCHES)	NW_003871055.3 (1367192..1367356, complement)

Chromosome 1 - NC_000001.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

RNA, U1 small nuclear 12 (pseudogene)
RNA, U1 small nuclear pseudogene 2
RNA, variant U1 small nuclear 11

Gene Ontology Provided by GOA

Function	Evidence Code	Pubs
enables pre-mRNA 5'-splice site binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in mRNA 5'-splice site recognition	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of U1 snRNP	IEA Inferred from Electronic Annotation more info

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.