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RN7SL5P RNA, 7SL, cytoplasmic 5, pseudogene [ Homo sapiens (human) ]

Gene ID: 6031, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SL5Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 5, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:10040
See related
AllianceGenome:HGNC:10040
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
7LEM1; RN7SLP2; RN7SL249P
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Genomic context

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Location:
9p23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (9441998..9442310)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (9453162..9453474)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (9441998..9442310)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type D Neighboring gene PTPRD antisense RNA 1 Neighboring gene ribosomal protein S26 pseudogene 3 Neighboring gene Sharpr-MPRA regulatory region 1388 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:9556889-9557562 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:9577422-9577610 Neighboring gene uncharacterized LOC105375972 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:9914591-9915090 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:9998786-9999985 Neighboring gene NANOG hESC enhancer GRCh37_chr9:10011672-10012190 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19773 Neighboring gene PTPRD divergent transcript

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Other Names

  • RNA, 7SL, cytoplasmic 249, pseudogene
  • RNA, 7SL, cytoplasmic, pseudogene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002426.2 

    Range
    101..413
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    9441998..9442310
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    9453162..9453474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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