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SNORD100 small nucleolar RNA, C/D box 100 [ Homo sapiens (human) ]

Gene ID: 594838, updated on 10-Oct-2023

Summary

Official Symbol
SNORD100provided by HGNC
Official Full Name
small nucleolar RNA, C/D box 100provided by HGNC
Primary source
HGNC:HGNC:32763
See related
Ensembl:ENSG00000221500 AllianceGenome:HGNC:32763
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HBII-429
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Genomic context

See SNORD100 in Genome Data Viewer
Location:
6q23.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (132816802..132816877)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (134011824..134011899)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (133137941..133138016)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986644 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25076 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:133134673-133135419 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25078 Neighboring gene small nucleolar RNA, C/D box 101 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25079 Neighboring gene ribosomal protein S12 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25080 Neighboring gene small nucleolar RNA, H/ACA box 33 Neighboring gene high mobility group box 1 pseudogene 13

Genomic regions, transcripts, and products

General gene information

Other Names

  • C/D box snoRNA HBII-429

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002435.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AB061840
    Related
    ENST00000408573.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    132816802..132816877
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    134011824..134011899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)