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Cd200r1 CD200 receptor 1 [ Mus musculus (house mouse) ]

Gene ID: 57781, updated on 5-Mar-2024

Summary

Official Symbol
Cd200r1provided by MGI
Official Full Name
CD200 receptor 1provided by MGI
Primary source
MGI:MGI:1889024
See related
Ensembl:ENSMUSG00000022667 AllianceGenome:MGI:1889024
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
OX2R; Mox2r; CD200R
Summary
Enables signaling receptor activity. Predicted to be involved in several processes, including negative regulation of interleukin-6 production; negative regulation of leukocyte migration; and negative regulation of neuroinflammatory response. Located in external side of plasma membrane. Is expressed in central nervous system; liver lobe; retina; and thymus primordium. Orthologous to several human genes including CD200R1 (CD200 receptor 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in liver E18 (RPKM 1.8), liver E14 (RPKM 1.3) and 22 other tissues See more
Orthologs
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Genomic context

Location:
16 B4; 16 29.08 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (44586141..44615341)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (44765736..44794977)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30445 Neighboring gene STARR-positive B cell enhancer ABC_E10905 Neighboring gene nucleolus and neural progenitor protein Neighboring gene GTP-binding protein 8 (putative) Neighboring gene STARR-positive B cell enhancer mm9_chr16:44746411-44746712 Neighboring gene STARR-positive B cell enhancer ABC_E5543 Neighboring gene lactate dehydrogenase A pseudogene Neighboring gene synaptotagmin binding, cytoplasmic RNA interacting protein pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (5)  1 citation
  • Endonuclease-mediated (5) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding involved in heterotypic cell-cell adhesion ISO
Inferred from Sequence Orthology
more info
 
enables signaling receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables signaling receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
is_active_in external side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in external side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
part_of receptor complex ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
cell surface glycoprotein CD200 receptor 1
Names
CD200 cell surface glycoprotein receptor
Orexin receptor 2
antigen identified by monoclonal antibody MRC OX-2 receptor
cell surface glycoprotein OX2 receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_021325.4NP_067300.1  cell surface glycoprotein CD200 receptor 1 precursor

    See identical proteins and their annotated locations for NP_067300.1

    Status: VALIDATED

    Source sequence(s)
    AC122217
    Consensus CDS
    CCDS28189.1
    UniProtKB/Swiss-Prot
    Q9ES57
    Related
    ENSMUSP00000053822.9, ENSMUST00000057488.15
    Conserved Domains (3) summary
    smart00410
    Location:106146
    IG_like; Immunoglobulin like
    pfam07686
    Location:42147
    V-set; Immunoglobulin V-set domain
    cl11960
    Location:162222
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    44586141..44615341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)