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Sult5a1 sulfotransferase family 5A, member 1 [ Mus musculus (house mouse) ]

Gene ID: 57429, updated on 10-Feb-2024

Summary

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Official Symbol
Sult5a1provided by MGI
Official Full Name
sulfotransferase family 5A, member 1provided by MGI
Primary source
MGI:MGI:1931463
See related
Ensembl:ENSMUSG00000000739 AllianceGenome:MGI:1931463
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Sultx1; Sult-x1
Summary
Predicted to enable sulfotransferase activity. Predicted to be involved in sulfation. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in liver adult (RPKM 20.6), genital fat pad adult (RPKM 15.1) and 11 other tissues See more
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Genomic context

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Location:
8 E1; 8 72.06 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (123869582..123885170, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (123142843..123158914, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L13 Neighboring gene microRNA 7079 Neighboring gene copine VII Neighboring gene microRNA 7080 Neighboring gene predicted gene, 57791 Neighboring gene predicted gene 4316

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Human cytosolic sulfotransferase database mining: identification of seven novel genes and pseudogenes. Freimuth RR, et al. Pharmacogenomics J, 2004. PMID 14676822
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables sulfotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in sulfation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
sulfotransferase family 5A, member 1
Names
sulfotransferase related gene X1
sulfotransferase-related protein SULT-X1
NP_065589.2
XP_006531293.1
XP_006531294.3
XP_006531295.3
XP_030099560.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_020564.3 → NP_065589.2  sulfotransferase family 5A, member 1

    See identical proteins and their annotated locations for NP_065589.2

    Status: VALIDATED

    Source sequence(s)
    CJ065192, CO044978
    Consensus CDS
    CCDS22749.1
    UniProtKB/TrEMBL
    O35402, Q91X36
    Related
    ENSMUSP00000000755.8, ENSMUST00000000755.15
    Conserved Domains (1) summary
    pfam00685
    Location:36 → 283
    Sulfotransfer_1; Sulfotransferase domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    123869582..123885170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006531230.5 → XP_006531293.1  sulfotransferase family 5A, member 1 isoform X1

    See identical proteins and their annotated locations for XP_006531293.1

    UniProtKB/TrEMBL
    O35402, Q91X36
    Conserved Domains (1) summary
    pfam00685
    Location:36 → 283
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_030243700.2 → XP_030099560.1  sulfotransferase family 5A, member 1 isoform X4

    UniProtKB/TrEMBL
    Q3UQP7
    Related
    ENSMUSP00000123501.2, ENSMUST00000122819.8
    Conserved Domains (1) summary
    pfam00685
    Location:36 → 171
    Sulfotransfer_1; Sulfotransferase domain

  3. XM_006531231.5 → XP_006531294.3  sulfotransferase family 5A, member 1 isoform X2

    UniProtKB/TrEMBL
    D3Z6D1
    Conserved Domains (1) summary
    pfam00685
    Location:36 → 193
    Sulfotransfer_1; Sulfotransferase domain

  4. XM_006531232.5 → XP_006531295.3  sulfotransferase family 5A, member 1 isoform X3

    UniProtKB/TrEMBL
    D3Z6D1
    Related
    ENSMUSP00000122415.2, ENSMUST00000137998.2
    Conserved Domains (1) summary
    pfam00685
    Location:36 → 193
    Sulfotransfer_1; Sulfotransferase domain

RNA

  1. XR_003947321.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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