Tmem9b TMEM9 domain family, member B [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Tmem9bprovided by MGI
Official Full Name: TMEM9 domain family, member Bprovided by MGI
Primary source: MGI:MGI:1915254
See related: Ensembl:ENSMUSG00000031021 AllianceGenome:MGI:1915254
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: D7H11orf15; 2310004K06Rik; ICRFP703B1614Q5.3
Summary: Predicted to be located in endosome and lysosomal membrane. Predicted to be integral component of membrane. Orthologous to human TMEM9B (TMEM9 domain family member B). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in frontal lobe adult (RPKM 34.8), cortex adult (RPKM 34.0) and 28 other tissues See more
Orthologs: human all
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Genomic context

Location:: 7 E3; 7 57.47 cM

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	7	NC_000073.7 (109335043..109351470, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	7	NC_000073.6 (109735836..109752263, complement)

Chromosome 7 - NC_000073.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (4)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

AW539847 (e-PCR)
- UniSTS:179621

RH128851 (e-PCR)
- UniSTS:212159

Gene Ontology Provided by MGI

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
located_in early endosome membrane	ISO Inferred from Sequence Orthology more info
located_in endosome	IEA Inferred from Electronic Annotation more info
located_in lysosomal membrane	ISO Inferred from Sequence Orthology more info
located_in lysosome	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: transmembrane protein 9B

Names: ICRFP703N2430Q5.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.