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Dnah10 dynein, axonemal, heavy chain 10 [ Mus musculus (house mouse) ]

Gene ID: 56087, updated on 5-Mar-2024

Summary

Official Symbol
Dnah10provided by MGI
Official Full Name
dynein, axonemal, heavy chain 10provided by MGI
Primary source
MGI:MGI:1860299
See related
Ensembl:ENSMUSG00000038011 AllianceGenome:MGI:1860299
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Dnahc10
Summary
Predicted to enable dynein intermediate chain binding activity; dynein light intermediate chain binding activity; and minus-end-directed microtubule motor activity. Predicted to be involved in microtubule-based movement. Predicted to act upstream of or within cilium movement. Predicted to be part of inner dynein arm. Predicted to be active in axoneme. Is expressed in embryo. Human ortholog(s) of this gene implicated in spermatogenic failure. Orthologous to human DNAH10 (dynein axonemal heavy chain 10). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis adult (RPKM 4.7), lung adult (RPKM 1.5) and 1 other tissue See more
Orthologs
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Genomic context

Location:
5 F- G1.1; 5 63.78 cM
Exon count:
80
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (124802149..124911372)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (124725085..124834308)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E10353 Neighboring gene STARR-seq mESC enhancer starr_14344 Neighboring gene tectonic family member 2 Neighboring gene STARR-positive B cell enhancer mm9_chr5:125079413-125079714 Neighboring gene ATPase, H+ transporting, lysosomal V0 subunit A2 Neighboring gene coiled-coil domain containing 92 Neighboring gene zinc finger protein 664

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables dynein intermediate chain binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables dynein light intermediate chain binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables microtubule motor activity IC
Inferred by Curator
more info
PubMed 
enables minus-end-directed microtubule motor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cilium movement IC
Inferred by Curator
more info
PubMed 
involved_in cilium movement involved in cell motility IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in 9+2 motile cilium IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of dynein complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of inner dynein arm ISM
Inferred from Sequence Model
more info
PubMed 

General protein information

Preferred Names
dynein axonemal heavy chain 10
Names
dynein, axon, heavy chain 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019536.1NP_062409.1  dynein axonemal heavy chain 10

    Status: PROVISIONAL

    Source sequence(s)
    AC164649, AC242457
    Consensus CDS
    CCDS51649.1
    UniProtKB/TrEMBL
    D3YYQ8, F7ABZ6
    Related
    ENSMUSP00000062995.9, ENSMUST00000058440.12
    Conserved Domains (6) summary
    pfam03028
    Location:38844580
    Dynein_heavy; Dynein heavy chain and region D6 of dynein motor
    pfam08385
    Location:306878
    DHC_N1; Dynein heavy chain, N-terminal region 1
    pfam08393
    Location:13771780
    DHC_N2; Dynein heavy chain, N-terminal region 2
    pfam12777
    Location:31653498
    MT; Microtubule-binding stalk of dynein motor
    pfam12781
    Location:35273743
    AAA_9; ATP-binding dynein motor region D5
    cl21455
    Location:19142142
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    124802149..124911372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036165323.1XP_036021216.1  dynein axonemal heavy chain 10 isoform X1

    UniProtKB/TrEMBL
    F7ABZ6
    Conserved Domains (6) summary
    COG5245
    Location:5633524
    DYN1; Dynein, heavy chain [Cytoskeleton]
    pfam08385
    Location:4169
    DHC_N1; Dynein heavy chain, N-terminal region 1
    pfam08393
    Location:6651070
    DHC_N2; Dynein heavy chain, N-terminal region 2
    pfam12774
    Location:12051531
    AAA_6; Hydrolytic ATP binding site of dynein motor region D1
    pfam12780
    Location:21842443
    AAA_8; P-loop containing dynein motor region D4
    pfam18199
    Location:35813879
    Dynein_C; Dynein heavy chain C-terminal domain
  2. XM_036165324.1XP_036021217.1  dynein axonemal heavy chain 10 isoform X2

    UniProtKB/TrEMBL
    F7ABZ6
  3. XM_036165326.1XP_036021219.1  dynein axonemal heavy chain 10 isoform X3

  4. XM_036165325.1XP_036021218.1  dynein axonemal heavy chain 10 isoform X3