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Or13j1 olfactory receptor family 13 subfamily J member 1 [ Mus musculus (house mouse) ]

Gene ID: 56015, updated on 8-Feb-2024

Summary

Official Symbol
Or13j1provided by MGI
Official Full Name
olfactory receptor family 13 subfamily J member 1provided by MGI
Primary source
MGI:MGI:1860080
See related
Ensembl:ENSMUSG00000046450 AllianceGenome:MGI:1860080
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mOR17; Olfr71; MOR262-4
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
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Genomic context

See Or13j1 in Genome Data Viewer
Location:
4 A5; 4 23.05 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (43705628..43706566, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (43705628..43706566, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 8B Neighboring gene olfactory receptor family 13 subfamily E member 8 Neighboring gene STARR-seq mESC enhancer starr_10058 Neighboring gene histidine rich carboxyl terminus 1 Neighboring gene small regulatory polypeptide of amino acid response

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 
  • Endonuclease-mediated (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
olfactory receptor 71
Names
GA_x6K02T2N78B-16230286-16231224
olfactory receptor MOR262-4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019486.1NP_062359.1  olfactory receptor 71

    See identical proteins and their annotated locations for NP_062359.1

    Status: VALIDATED

    Source sequence(s)
    AJ133429
    Consensus CDS
    CCDS18110.1
    UniProtKB/TrEMBL
    Q496W8, Q9QZ18
    Related
    ENSMUSP00000060230.2, ENSMUST00000055401.2
    Conserved Domains (2) summary
    pfam00001
    Location:41290
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:32304
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    43705628..43706566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)