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PARPBP PARP1 binding protein [ Homo sapiens (human) ]

Gene ID: 55010, updated on 3-Apr-2024

Summary

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Official Symbol
PARPBPprovided by HGNC
Official Full Name
PARP1 binding proteinprovided by HGNC
Primary source
HGNC:HGNC:26074
See related
Ensembl:ENSG00000185480 MIM:613687; AllianceGenome:HGNC:26074
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AROM; PARI; C12orf48
Summary
Predicted to enable DNA binding activity. Involved in negative regulation of double-strand break repair via homologous recombination. Located in chromatin and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in bone marrow (RPKM 2.3), testis (RPKM 1.7) and 22 other tissues See more
Orthologs
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Genomic context

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Location:
12q23.2
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (102120183..102197520)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (102081315..102158656)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (102513961..102591298)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene WASH complex subunit 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6877 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6878 Neighboring gene nucleoporin 37 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6879 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:102514807-102515364 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:102546739-102547240 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6880 Neighboring gene uncharacterized LOC124902998 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_22888 Neighboring gene pro-melanin concentrating hormone Neighboring gene RNA, 7SL, cytoplasmic 793, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Poly (ADP-ribose) polymerase-1 Binding Protein Facilitates Lung Adenocarcinoma Cell Proliferation and Correlates with Poor Prognosis. Xu D, et al. Ann Clin Lab Sci, 2019 Sep. PMID 31611199
  2. PARI (PARPBP) suppresses replication stress-induced myeloid differentiation in leukemia cells. Nicolae CM, et al. Oncogene, 2019 Jul. PMID 30967629
  3. Overexpression of PARPBP Correlates with Tumor Progression and Poor Prognosis in Hepatocellular Carcinoma. Yu B, et al. Dig Dis Sci, 2019 Oct. PMID 30949905
  4. The PCNA-associated protein PARI negatively regulates homologous recombination via the inhibition of DNA repair synthesis. Burkovics P, et al. Nucleic Acids Res, 2016 Apr 20. PMID 26792895, Free PMC Article
  5. Meta-analysis of the cell cycle related C12orf48. Varisli L. Biocell, 2013 Apr. PMID 24396997

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. SNORA70E promotes the occurrence and development of ovarian cancer through pseudouridylation modification of RAP1B and alternative splicing of PARPBP.
    Title: SNORA70E promotes the occurrence and development of ovarian cancer through pseudouridylation modification of RAP1B and alternative splicing of PARPBP.
  2. PARP1-binding protein was significantly upregulated in Hepatocellular Carcinoma tissues compared with normal liver. High PARPBP expression was associated with elevated serum AFP level, vascular invasion, poor tumor differentiation, and advanced TNM stage.
    Title: Overexpression of PARPBP Correlates with Tumor Progression and Poor Prognosis in Hepatocellular Carcinoma.
  3. PARPBP expression is enhanced in lung adenocarcinoma tissues and is a potential factor in the progression of lung adenocarcinoma.
    Title: Poly (ADP-ribose) polymerase-1 Binding Protein Facilitates Lung Adenocarcinoma Cell Proliferation and Correlates with Poor Prognosis.
  4. show that PARI expression negatively correlates with expression of differentiation markers in clinical myeloid leukemia samples, suggesting that targeting PARI may restore differentiation ability of leukemia cells and antagonize their proliferation
    Title: PARI (PARPBP) suppresses replication stress-induced myeloid differentiation in leukemia cells.
  5. PARI plays potential oncogenic roles and functions as a transcriptional target and effector of FOXM1 in gastric cancer development
    Title: PARI functions as a new transcriptional target of FOXM1 involved in gastric cancer development.
  6. PARI is a latent modulator of stalled fork processing, which is required for stable genome inheritance under both endogenous and exogenous replication stress
    Title: PARI Regulates Stalled Replication Fork Processing To Maintain Genome Stability upon Replication Stress in Mice.
  7. PARI inhibits homologous recombination in vivo, and its knockdown suppresses the UV sensitivity of RAD18-depleted cells
    Title: The PCNA-associated protein PARI negatively regulates homologous recombination via the inhibition of DNA repair synthesis.
  8. PARI overexpression promotes genomic instability and pancreatic tumorigenesis.
    Title: PARI overexpression promotes genomic instability and pancreatic tumorigenesis.
  9. Knockdown of C12orf48 by siRNA in HeLa cells significantly suppressed their growth
    Title: GeneFriends: an online co-expression analysis tool to identify novel gene targets for aging and complex diseases.
  10. PARI suppresses inappropriate recombination events at mammalian replication forks.
    Title: Inhibition of homologous recombination by the PCNA-interacting protein PARI.
Submit: New GeneRIF Correction See all GeneRIFs (12)

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Identification of 15 loci influencing height in a Korean population.
EBI GWAS Catalog

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • FLJ20641

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
  
involved_in negative regulation of double-strand break repair via homologous recombination IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in negative regulation of double-strand break repair via homologous recombination IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of chromatin IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleoplasm IDA
Inferred from Direct Assay
more info
  

General protein information

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Preferred Names
PCNA-interacting partner

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001319988.2 → NP_001306917.1  PCNA-interacting partner isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
    Source sequence(s)
    AC079907, AC087882
    Consensus CDS
    CCDS81728.1
    UniProtKB/TrEMBL
    B4DZ31
    Related
    ENSP00000440850.1, ENST00000541394.5
    Conserved Domains (1) summary
    TIGR01074
    Location:249 → 393
    rep; ATP-dependent DNA helicase Rep

  2. NM_001319993.2 → NP_001306922.1  PCNA-interacting partner isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) contains an alternate exon and lacks an exon in the 5' region, and initiates translation at downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus and is shorter than isoform 1. Variants 3 and 4 encode the same isoform (3).
    Source sequence(s)
    AC079907, AC087882
    Consensus CDS
    CCDS81730.1
    Conserved Domains (1) summary
    TIGR01074
    Location:91 → 235
    rep; ATP-dependent DNA helicase Rep

  3. NM_001319994.2 → NP_001306923.1  PCNA-interacting partner isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) uses an alternate splice site and lacks an exon in the 5' region, and initiates translation at downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus and is shorter than isoform 1. Variants 3 and 4 encode the same isoform (3).
    Source sequence(s)
    AC079907, AC087882
    Consensus CDS
    CCDS81730.1
    Related
    ENSP00000376643.2, ENST00000392911.6
    Conserved Domains (1) summary
    TIGR01074
    Location:91 → 235
    rep; ATP-dependent DNA helicase Rep

  4. NM_001319995.3 → NP_001306924.1  PCNA-interacting partner isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) contains an alternate exon and lacks an exon in the 5' region, lacks multiple 3' coding exons, and contains an alternate 3' coding region and 3' UTR, compared to variant 1. It initiates translation at a downstream start codon. The encoded isoform (4) has a shorter N-terminus and a distinct C-terminus, and is shorter than isoform 1.
    Source sequence(s)
    AC087882, AF274940, BC070270, CA415422, DB260405
    UniProtKB/Swiss-Prot
    Q9NWS1
    UniProtKB/TrEMBL
    Q9BZU5
    Conserved Domains (1) summary
    TIGR01074
    Location:91 → 140
    rep; ATP-dependent DNA helicase Rep

  5. NM_001319996.2 → NP_001306925.1  PCNA-interacting partner isoform 5

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) lacks multiple 3' coding exons and differs in the 3' coding region and 3' UTR compared to variant 1. The encoded isoform (5) has a shorter, distinct C-terminus, compared to isoform 1.
    Source sequence(s)
    AC079907, AC087882
    Consensus CDS
    CCDS81729.1
    UniProtKB/TrEMBL
    G8JLI2
    Related
    ENSP00000442549.1, ENST00000537257.5

  6. NM_001382721.1 → NP_001369650.1  PCNA-interacting partner isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  7. NM_001382722.1 → NP_001369651.1  PCNA-interacting partner isoform 7

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  8. NM_001382723.1 → NP_001369652.1  PCNA-interacting partner isoform 8

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  9. NM_001382724.1 → NP_001369653.1  PCNA-interacting partner isoform 9

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  10. NM_001382725.1 → NP_001369654.1  PCNA-interacting partner isoform 10

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  11. NM_001382726.1 → NP_001369655.1  PCNA-interacting partner isoform 11

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  12. NM_001382728.1 → NP_001369657.1  PCNA-interacting partner isoform 12

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  13. NM_001382729.1 → NP_001369658.1  PCNA-interacting partner isoform 13

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  14. NM_001382731.1 → NP_001369660.1  PCNA-interacting partner isoform 14

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882
    UniProtKB/TrEMBL
    J3KQY3
    Related
    ENSP00000411313.2, ENST00000417507.6

  15. NM_001382732.1 → NP_001369661.1  PCNA-interacting partner isoform 15

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882
    UniProtKB/TrEMBL
    A0A0C4DG30
    Related
    ENSP00000393867.2, ENST00000412715.3

  16. NM_001382735.1 → NP_001369664.1  PCNA-interacting partner isoform 16

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882
    Consensus CDS
    CCDS91743.1
    UniProtKB/TrEMBL
    B4DT40
    Related
    ENSP00000444576.1, ENST00000543784.5

  17. NM_001400853.1 → NP_001387782.1  PCNA-interacting partner isoform 17

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  18. NM_001400854.1 → NP_001387783.1  PCNA-interacting partner isoform 18

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  19. NM_001400855.1 → NP_001387784.1  PCNA-interacting partner isoform 19

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  20. NM_001400856.1 → NP_001387785.1  PCNA-interacting partner isoform 20

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  21. NM_001400857.1 → NP_001387786.1  PCNA-interacting partner isoform 21

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  22. NM_001400858.1 → NP_001387787.1  PCNA-interacting partner isoform 22

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  23. NM_001400859.1 → NP_001387788.1  PCNA-interacting partner isoform 23

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  24. NM_001400860.1 → NP_001387789.1  PCNA-interacting partner isoform 23

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  25. NM_001400861.1 → NP_001387790.1  PCNA-interacting partner isoform 23

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  26. NM_001400862.1 → NP_001387791.1  PCNA-interacting partner isoform 24

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  27. NM_001400863.1 → NP_001387792.1  PCNA-interacting partner isoform 25

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  28. NM_001400864.1 → NP_001387793.1  PCNA-interacting partner isoform 26

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  29. NM_001400865.1 → NP_001387794.1  PCNA-interacting partner isoform 27

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  30. NM_001400866.1 → NP_001387795.1  PCNA-interacting partner isoform 28

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  31. NM_001400867.1 → NP_001387796.1  PCNA-interacting partner isoform 29

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  32. NM_001400868.1 → NP_001387797.1  PCNA-interacting partner isoform 30

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  33. NM_001400869.1 → NP_001387798.1  PCNA-interacting partner isoform 12

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  34. NM_001400870.1 → NP_001387799.1  PCNA-interacting partner isoform 12

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  35. NM_001400871.1 → NP_001387800.1  PCNA-interacting partner isoform 12

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  36. NM_001400872.1 → NP_001387801.1  PCNA-interacting partner isoform 32

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  37. NM_001400873.1 → NP_001387802.1  PCNA-interacting partner isoform 33

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  38. NM_001400874.1 → NP_001387803.1  PCNA-interacting partner isoform 34

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  39. NM_001400875.1 → NP_001387804.1  PCNA-interacting partner isoform 35

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  40. NM_001400876.1 → NP_001387805.1  PCNA-interacting partner isoform 36

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  41. NM_001400877.1 → NP_001387806.1  PCNA-interacting partner isoform 37

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  42. NM_001400878.1 → NP_001387807.1  PCNA-interacting partner isoform 38

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  43. NM_001400879.1 → NP_001387808.1  PCNA-interacting partner isoform 39

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  44. NM_001400880.1 → NP_001387809.1  PCNA-interacting partner isoform 40

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  45. NM_001400881.1 → NP_001387810.1  PCNA-interacting partner isoform 41

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  46. NM_001400883.1 → NP_001387812.1  PCNA-interacting partner isoform 42

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  47. NM_001400884.1 → NP_001387813.1  PCNA-interacting partner isoform 43

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  48. NM_001400885.1 → NP_001387814.1  PCNA-interacting partner isoform 44

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  49. NM_001400886.1 → NP_001387815.1  PCNA-interacting partner isoform 45

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  50. NM_001400887.1 → NP_001387816.1  PCNA-interacting partner isoform 46

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  51. NM_001400888.1 → NP_001387817.1  PCNA-interacting partner isoform 46

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  52. NM_001400889.1 → NP_001387818.1  PCNA-interacting partner isoform 46

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  53. NM_001400890.1 → NP_001387819.1  PCNA-interacting partner isoform 47

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  54. NM_001400891.1 → NP_001387820.1  PCNA-interacting partner isoform 48

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  55. NM_001400892.1 → NP_001387821.1  PCNA-interacting partner isoform 49

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  56. NM_001400893.1 → NP_001387822.1  PCNA-interacting partner isoform 49

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  57. NM_001400894.1 → NP_001387823.1  PCNA-interacting partner isoform 49

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  58. NM_001400895.1 → NP_001387824.1  PCNA-interacting partner isoform 49

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  59. NM_001400896.1 → NP_001387825.1  PCNA-interacting partner isoform 50

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  60. NM_001400897.1 → NP_001387826.1  PCNA-interacting partner isoform 51

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  61. NM_001400902.1 → NP_001387831.1  PCNA-interacting partner isoform 52

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  62. NM_001400903.1 → NP_001387832.1  PCNA-interacting partner isoform 53

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  63. NM_001400904.1 → NP_001387833.1  PCNA-interacting partner isoform 54

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  64. NM_001400905.1 → NP_001387834.1  PCNA-interacting partner isoform 54

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  65. NM_001400906.1 → NP_001387835.1  PCNA-interacting partner isoform 55

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  66. NM_001400907.1 → NP_001387836.1  PCNA-interacting partner isoform 61

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  67. NM_001400925.1 → NP_001387854.1  PCNA-interacting partner isoform 56

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  68. NM_001400926.1 → NP_001387855.1  PCNA-interacting partner isoform 57

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  69. NM_001400927.1 → NP_001387856.1  PCNA-interacting partner isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882
    Consensus CDS
    CCDS81729.1

  70. NM_001400928.1 → NP_001387857.1  PCNA-interacting partner isoform 59

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  71. NM_001400929.1 → NP_001387858.1  PCNA-interacting partner isoform 60

    Status: VALIDATED

    Source sequence(s)
    AC079907, AC087882

  72. NM_017915.5 → NP_060385.3  PCNA-interacting partner isoform 2

    See identical proteins and their annotated locations for NP_060385.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate in-frame splice site compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
    Source sequence(s)
    AC079907, AC087882
    Consensus CDS
    CCDS9090.2
    UniProtKB/Swiss-Prot
    B4E0Y0, Q05C00, Q499L8, Q4FZA0, Q4KMW7, Q6NSC6, Q6PJA1, Q86W36, Q9NWS1
    Related
    ENSP00000332915.3, ENST00000327680.7
    Conserved Domains (1) summary
    TIGR01074
    Location:172 → 316
    rep; ATP-dependent DNA helicase Rep

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    102120183..102197520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047429048.1 → XP_047285004.1  PCNA-interacting partner isoform X2

  2. XM_047429049.1 → XP_047285005.1  PCNA-interacting partner isoform X5

  3. XM_047429050.1 → XP_047285006.1  PCNA-interacting partner isoform X6

  4. XM_011538514.3 → XP_011536816.1  PCNA-interacting partner isoform X1

    See identical proteins and their annotated locations for XP_011536816.1

    Conserved Domains (1) summary
    TIGR01074
    Location:91 → 235
    rep; ATP-dependent DNA helicase Rep

  5. XM_047429052.1 → XP_047285008.1  PCNA-interacting partner isoform X8

  6. XM_047429051.1 → XP_047285007.1  PCNA-interacting partner isoform X7

  7. XM_047429055.1 → XP_047285011.1  PCNA-interacting partner isoform X11

  8. XM_017019541.3 → XP_016875030.1  PCNA-interacting partner isoform X3

  9. XM_047429054.1 → XP_047285010.1  PCNA-interacting partner isoform X10

  10. XM_047429053.1 → XP_047285009.1  PCNA-interacting partner isoform X9

  11. XM_047429056.1 → XP_047285012.1  PCNA-interacting partner isoform X12

  12. XM_047429057.1 → XP_047285013.1  PCNA-interacting partner isoform X13

  13. XM_011538515.2 → XP_011536817.1  PCNA-interacting partner isoform X4

RNA

  1. XR_007063095.1 RNA Sequence

  2. XR_007063096.1 RNA Sequence

  3. XR_007063097.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    102081315..102158656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054372369.1 → XP_054228344.1  PCNA-interacting partner isoform X2

  2. XM_054372372.1 → XP_054228347.1  PCNA-interacting partner isoform X5

  3. XM_054372373.1 → XP_054228348.1  PCNA-interacting partner isoform X6

  4. XM_054372368.1 → XP_054228343.1  PCNA-interacting partner isoform X1

  5. XM_054372375.1 → XP_054228350.1  PCNA-interacting partner isoform X8

  6. XM_054372374.1 → XP_054228349.1  PCNA-interacting partner isoform X7

  7. XM_054372378.1 → XP_054228353.1  PCNA-interacting partner isoform X11

  8. XM_054372370.1 → XP_054228345.1  PCNA-interacting partner isoform X3

  9. XM_054372377.1 → XP_054228352.1  PCNA-interacting partner isoform X10

  10. XM_054372376.1 → XP_054228351.1  PCNA-interacting partner isoform X9

  11. XM_054372379.1 → XP_054228354.1  PCNA-interacting partner isoform X12

  12. XM_054372380.1 → XP_054228355.1  PCNA-interacting partner isoform X13

  13. XM_054372371.1 → XP_054228346.1  PCNA-interacting partner isoform X4

RNA

  1. XR_008488627.1 RNA Sequence

  2. XR_008488628.1 RNA Sequence

  3. XR_008488629.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9NWS1.3 GenPept UniProtKB/Swiss-Prot:Q9NWS1

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