Cfap73 cilia and flagella associated protein 73 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Cfap73provided by MGI
Official Full Name: cilia and flagella associated protein 73provided by MGI
Primary source: MGI:MGI:3779542
See related: Ensembl:ENSMUSG00000094282 AllianceGenome:MGI:3779542
Gene type: protein coding
RefSeq status: INFERRED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Gm5988; Ccdc42b
Summary: Predicted to be located in cilium; cytoplasm; and cytoskeleton. Orthologous to human CFAP73 (cilia and flagella associated protein 73). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in testis adult (RPKM 17.6), lung adult (RPKM 3.9) and 6 other tissues See more
Orthologs: human all
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Genomic context

Location:: 5 F; 5

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	5	NC_000071.7 (120766400..120772300, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	5	NC_000071.6 (120628335..120634235, complement)

Chromosome 5 - NC_000071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (2)

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info
involved_in spermatid development	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in cell projection	IEA Inferred from Electronic Annotation more info
is_active_in cellular_component	ND No biological Data available more info
located_in cilium	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: cilia- and flagella-associated protein 73

Names: coiled-coil domain containing 42B; coiled-coil domain-containing protein 42B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001195094.1 → NP_001182023.1 cilia- and flagella-associated protein 73

Status: INFERRED

Source sequence(s)

AC125183

Consensus CDS

CCDS57376.1

UniProtKB/Swiss-Prot

J3QPZ5

Related

ENSMUSP00000137554.2, ENSMUST00000177908.2

Conserved Domains (1) summary

pfam13863
Location:36 → 151

DUF4200; Domain of unknown function (DUF4200)