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AAdacl4fm3 AADACL4 family member 3 [ Mus musculus (house mouse) ]

Gene ID: 546849, updated on 8-Feb-2024

Summary

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Official Symbol
AAdacl4fm3provided by MGI
Official Full Name
AADACL4 family member 3provided by MGI
Primary source
MGI:MGI:3650721
See related
Ensembl:ENSMUSG00000041735 AllianceGenome:MGI:3650721
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm437; Gm13178
Summary
Predicted to enable hydrolase activity. Orthologous to human AADACL4 (arylacetamide deacetylase like 4). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
4 E1; 4 78.05 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (144429716..144448062, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (144703146..144721492, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene arylacetamide deacetylase like 4 Neighboring gene AADACL4 family member 4 Neighboring gene STARR-seq mESC enhancer starr_11988 Neighboring gene STARR-seq mESC enhancer starr_11989 Neighboring gene predicted gene, 25938 Neighboring gene AADACL4 family member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC546849

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001085536.2 → NP_001079005.1  uncharacterized protein LOC546849

    Status: VALIDATED

    Source sequence(s)
    AL714028
    Consensus CDS
    CCDS38958.1
    UniProtKB/TrEMBL
    B1AVU7
    Related
    ENSMUSP00000045343.8, ENSMUST00000036876.8
    Conserved Domains (2) summary
    COG0657
    Location:85 → 379
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    cl21494
    Location:116 → 382
    Abhydrolase; alpha/beta hydrolases

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    144429716..144448062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036164252.1 → XP_036020145.1  uncharacterized protein LOC546849 isoform X1

    Related
    ENSMUST00000209924.2
    Conserved Domains (1) summary
    cl21494
    Location:6 → 235
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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