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Serpina3h serine (or cysteine) peptidase inhibitor, clade A, member 3H [ Mus musculus (house mouse) ]

Gene ID: 546546, updated on 8-Feb-2024

Summary

Official Symbol
Serpina3hprovided by MGI
Official Full Name
serine (or cysteine) peptidase inhibitor, clade A, member 3Hprovided by MGI
Primary source
MGI:MGI:2182839
See related
Ensembl:ENSMUSG00000121484 AllianceGenome:MGI:2182839
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
6C28; Spi2
Expression
Broad expression in thymus adult (RPKM 2.7), subcutaneous fat pad adult (RPKM 2.6) and 16 other tissues See more
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Genomic context

Location:
12 E; 12 53.74 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (104214155..104220664)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (104247896..104254405)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene developmentally regulated GTP binding protein 2 pseudogene Neighboring gene serine (or cysteine) peptidase inhibitor, clade A, member 3G Neighboring gene STARR-seq mESC enhancer starr_33134 Neighboring gene serine (or cysteine) peptidase inhibitor, clade A, member 3I Neighboring gene microRNA 12183 Neighboring gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3J

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033450.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC142112
    Related
    ENSMUST00000245222.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    104214155..104220664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001034870.2: Suppressed sequence

    Description
    NM_001034870.2: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.