U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

lncRNA:osk long non-coding RNA:osk [ Drosophila melanogaster (fruit fly) ]

Gene ID: 54520463, updated on 29-Dec-2023

Summary

Go to the top of the page Help
Official Symbol
lncRNA:oskprovided by FlyBase
Official Full Name
long non-coding RNA:oskprovided by FlyBase
Primary source
FLYBASE:FBgn0286867
Locus tag
Dmel_CR46389
See related
AllianceGenome:FB:FBgn0286867
Gene type
ncRNA
RNA name
lncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR46389; Dmel\CR46389; lncRNA-osk; lncRNA-oskar; oskar
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See lncRNA:osk in Genome Data Viewer
Location:
85B7-85B7; 3-48 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (8935716..8938395)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene polychaetoid Neighboring gene transfer RNA:Arginine-TCG 2-4 Neighboring gene antisense RNA:CR44020 Neighboring gene Succinyl-coenzyme A synthetase beta subunit, ADP-forming Neighboring gene oskar Neighboring gene uncharacterized protein Neighboring gene ichor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NT_033777.3 Chromosome 3R Reference Release 6 plus ISO1 MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Knock down analysis reveals critical phases for specific oskar noncoding RNA functions during Drosophila oogenesis. Kenny A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34586387, Free PMC Article
  2. Different roles for the adjoining and structurally similar A-rich and poly(A) domains of oskar mRNA: Only the A-rich domain is required for oskar noncoding RNA function, which includes MTOC positioning. Kenny A, et al. Dev Biol, 2021 Aug. PMID 33798537, Free PMC Article
  3. Multiple cis-acting signals, some weak by necessity, collectively direct robust transport of oskar mRNA to the oocyte. Ryu YH, et al. J Cell Sci, 2017 Sep 15. PMID 28760927, Free PMC Article
  4. Opposing roles for Egalitarian and Staufen in transport, anchoring and localization of oskar mRNA in the Drosophila oocyte. Mohr S, et al. PLoS Genet, 2021 Apr. PMID 33798193, Free PMC Article
  5. oskar RNA plays multiple noncoding roles to support oogenesis and maintain integrity of the germline/soma distinction. Kanke M, et al. RNA, 2015 Jun. PMID 25862242, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
  • alternate names: oskar; oskar RNA
  • lncRNA:osk-RA; Dmel\lncRNA:osk-RA; CR46389-RA; Dmel\CR46389-RA

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    8935716..8938395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_167812.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version