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Redic1 regulator of DNA class I crossover intermediates 1 [ Mus musculus (house mouse) ]

Gene ID: 545126, updated on 11-Apr-2024

Summary

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Official Symbol
Redic1provided by MGI
Official Full Name
regulator of DNA class I crossover intermediates 1provided by MGI
Primary source
MGI:MGI:3613655
See related
Ensembl:ENSMUSG00000078932 AllianceGenome:MGI:3613655
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm5807
Summary
Orthologous to human C12orf40 (chromosome 12 open reading frame 40). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
human all
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Genomic context

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Location:
15 E3; 15 46.04 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (91083654..91146291)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (91199446..91262088)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene Hormad1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_39495 Neighboring gene ATP-binding cassette, sub-family D member 2 Neighboring gene STARR-seq mESC enhancer starr_39496 Neighboring gene STARR-seq mESC enhancer starr_39497 Neighboring gene STARR-seq mESC enhancer starr_39498 Neighboring gene solute carrier family 2 (facilitated glucose transporter), member 13 Neighboring gene STARR-seq mESC enhancer starr_39499 Neighboring gene STARR-seq mESC enhancer starr_39500 Neighboring gene STARR-seq mESC enhancer starr_39501 Neighboring gene olfactomedin-like 2A pseudogene Neighboring gene tripartite motif-containing 59 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Transcriptome analysis of mouse stem cells and early embryos. Sharov AA, et al. PLoS Biol, 2003 Dec. PMID 14691545, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
acts_upstream_of_or_within meiotic cell cycle IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in chromosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
regulator of DNA class I crossover intermediates 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    91083654..91146291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030248865.2 → XP_030104725.1  regulator of DNA class I crossover intermediates 1

    UniProtKB/Swiss-Prot
    A0A087WRU1
    Related
    ENSMUSP00000140772.2, ENSMUST00000190436.7
    Conserved Domains (1) summary
    pfam15089
    Location:254 → 677
    DUF4552; Domain of unknown function (DUF4552)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A087WRU1.1 GenPept UniProtKB/Swiss-Prot:A0A087WRU1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials