U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Trcg1 taste receptor cell gene 1 [ Mus musculus (house mouse) ]

Gene ID: 541610, updated on 8-Feb-2024

Summary

Official Symbol
Trcg1provided by MGI
Official Full Name
taste receptor cell gene 1provided by MGI
Primary source
MGI:MGI:3576664
See related
Ensembl:ENSMUSG00000070298 AllianceGenome:MGI:3576664
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Is expressed in circumvallate papilla; tongue epithelium; and uterus. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
9 B; 9 30.89 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (57143839..57157147)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (57236556..57249864)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700041C23 gene Neighboring gene STARR-seq mESC enhancer starr_24219 Neighboring gene STARR-seq mESC enhancer starr_24220 Neighboring gene STARR-positive B cell enhancer ABC_E11407 Neighboring gene predicted gene, 46115 Neighboring gene RIKEN cDNA 1700017B05 gene Neighboring gene STARR-positive B cell enhancer ABC_E890 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:57126080-57126189 Neighboring gene STARR-seq mESC enhancer starr_24223 Neighboring gene STARR-seq mESC enhancer starr_24225 Neighboring gene STARR-seq mESC enhancer starr_24226 Neighboring gene predicted gene, 39343 Neighboring gene STARR-seq mESC enhancer starr_24227 Neighboring gene NSA2 ribosome biogenesis homolog pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
taste receptor cell protein 1
Names
taste receptor protein 1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001014398.2NP_001014420.2  taste receptor cell protein 1 precursor

    See identical proteins and their annotated locations for NP_001014420.2

    Status: VALIDATED

    Source sequence(s)
    AC151714, AY701870
    Consensus CDS
    CCDS23218.1
    UniProtKB/Swiss-Prot
    Q58Y73, Q58Y74
    UniProtKB/TrEMBL
    F8VPJ5
    Related
    ENSMUSP00000091357.4, ENSMUST00000093837.5
    Conserved Domains (1) summary
    PHA03247
    Location:101408
    PHA03247; large tegument protein UL36; Provisional

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    57143839..57157147
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)