U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

POLR2CP1 RNA polymerase II subunit C pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 54038, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
POLR2CP1provided by HGNC
Official Full Name
RNA polymerase II subunit C pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:9190
See related
AllianceGenome:HGNC:9190
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
POLR2CP
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
21q11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (14757558..14759215)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (13112796..13114453)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (16129879..16131536)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372738 Neighboring gene CRISPRi-validated cis-regulatory element chr21.70 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13215 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18277 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18278 Neighboring gene uncharacterized LOC124905054 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18279 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18281 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18282 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18280 Neighboring gene meiotic recombination hotspot B Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_61617 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_61623 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene 16 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18283 Neighboring gene adipocyte associated metabolic related lncRNA 1 Neighboring gene RBMX2 pseudogene 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The DNA sequence of human chromosome 21. Hattori M, et al. Nature, 2000 May 18. PMID 10830953

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Other Names

  • polymerase (RNA) II (DNA directed) polypeptide C, 33kDa pseudogene
  • polymerase (RNA) II (DNA directed) polypeptide C, pseudogene
  • polymerase (RNA) II subunit C pseudogene 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_000915.5 

    Range
    101..1758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    14757558..14759215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060945.1 Alternate T2T-CHM13v2.0

    Range
    13112796..13114453
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases