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VDAC2P1 VDAC2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 54015, updated on 10-Oct-2023

Summary

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Official Symbol
VDAC2P1provided by HGNC
Official Full Name
VDAC2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:12673
See related
AllianceGenome:HGNC:12673
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
VDAC2P
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Genomic context

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Location:
21q21.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (16094189..16095472, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (14449577..14450860, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (17466509..17467792, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr21:17125262-17125887 Neighboring gene RNA binding protein with multiple splicing-like pseudogene Neighboring gene ubiquitin specific peptidase 25 Neighboring gene Sharpr-MPRA regulatory region 15533 Neighboring gene NANOG hESC enhancer GRCh37_chr21:17357279-17357780 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr21:17364583-17365782 Neighboring gene RNA, U6 small nuclear 426, pseudogene Neighboring gene mir-99a-let-7c cluster host gene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:17517702-17518202 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:17518203-17518703 Neighboring gene Sharpr-MPRA regulatory region 14289 Neighboring gene ribosomal protein S26 pseudogene 5 Neighboring gene H3K27ac hESC enhancer GRCh37_chr21:17566156-17566916 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr21:17613639-17614628 Neighboring gene small nucleolar RNA, C/D box 74B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping of the human Voltage-Dependent Anion Channel isoforms 1 and 2 reconsidered. Messina A, et al. Biochem Biophys Res Commun, 1999 Feb 24. PMID 10049775
  2. The DNA sequence of human chromosome 21. Hattori M, et al. Nature, 2000 May 18. PMID 10830953

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • voltage dependent anion channel 2 pseudogene 1
  • voltage-dependent anion channel 2 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_000899.4 

    Range
    101..1384
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    16094189..16095472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060945.1 Alternate T2T-CHM13v2.0

    Range
    14449577..14450860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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