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Tspyl2 TSPY-like 2 [ Mus musculus (house mouse) ]

Gene ID: 52808, updated on 5-Mar-2024

Summary

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Official Symbol
Tspyl2provided by MGI
Official Full Name
TSPY-like 2provided by MGI
Primary source
MGI:MGI:106244
See related
Ensembl:ENSMUSG00000041096 AllianceGenome:MGI:106244
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CDA1; CINAP; DENTT; DXBwg1396e; DXHXS1008E; E130307F10Rik
Summary
Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in negative regulation of DNA replication; negative regulation of cell growth; and regulation of protein kinase activity. Predicted to act upstream of or within chromatin organization. Predicted to be located in nucleolus. Predicted to be active in chromatin and nucleus. Is expressed in several structures, including alimentary system; genitourinary system; heart; nervous system; and sensory organ. Orthologous to human TSPYL2 (TSPY like 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in cerebellum adult (RPKM 34.8), frontal lobe adult (RPKM 34.3) and 28 other tissues See more
Orthologs
human all
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Genomic context

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Location:
X F3; X 68.46 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (151119847..151125480, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (152336851..152342484, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_48091 Neighboring gene lysine demethylase 5C Neighboring gene STARR-seq mESC enhancer starr_48092 Neighboring gene STARR-seq mESC enhancer starr_48093 Neighboring gene Kdm5c adjacent non-coding transcript Neighboring gene STARR-positive B cell enhancer mm9_chrX:148771022-148771323 Neighboring gene G-protein coupled receptor 173 Neighboring gene RIKEN cDNA 3010001F23 gene Neighboring gene STARR-seq mESC enhancer starr_48095 Neighboring gene actin, beta pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. hCINAP regulates the differentiation of embryonic stem cells by regulating NEDD4 liquid-liquid phase-separation-mediated YAP1 activation. Zhuge R, et al. Cell Rep, 2023 Jan 31. PMID 36640330
  2. Tspyl2 Loss-of-Function Causes Neurodevelopmental Brain and Behavior Abnormalities in Mice. Li Q, et al. Behav Genet, 2016 Jul. PMID 26826030, Free PMC Article
  3. Withdrawal of skeletal muscle cells from cell cycle progression triggers differentiation of Toxoplasma gondii towards the bradyzoite stage. Swierzy IJ, et al. Cell Microbiol, 2015 Jan. PMID 25131712
  4. TSPYL2 is important for G1 checkpoint maintenance upon DNA damage. Tao KP, et al. PLoS One, 2011. PMID 21738728, Free PMC Article
  5. Differentially expressed nucleolar TGF-beta1 target (DENTT) in mouse development. Ozbun LL, et al. Dev Dyn, 2003 Mar. PMID 12619135

See all (33) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. hCINAP regulates the differentiation of embryonic stem cells by regulating NEDD4 liquid-liquid phase-separation-mediated YAP1 activation.
    Title: hCINAP regulates the differentiation of embryonic stem cells by regulating NEDD4 liquid-liquid phase-separation-mediated YAP1 activation.
  2. TSPYL2 is recruited to promoters of specific EZH2 target genes in neurons.
    Title: TSPYL2 Regulates the Expression of EZH2 Target Genes in Neurons.
  3. Homozygous CINAP-/- mice show embryonic lethality. The heterozygotes are viable and show defects in 18S rRNA processing.
    Title: The ATPase hCINAP regulates 18S rRNA processing and is essential for embryogenesis and tumour growth.
  4. The identification that diabetes is associated with upregulation of vascular CDA1 and that CDA1 deletion in diabetic mice promotes aneurysm formation provides evidence that CDA1 plays a role in diabetes to reduce susceptibility to aneurysm formation.
    Title: Diabetes Reduces Severity of Aortic Aneurysms Depending on the Presence of Cell Division Autoantigen 1 (CDA1).
  5. These findings suggest that disrupting Tspyl2 gene expression leads to behavioral and brain morphological alterations that mirror a number of neurodevelopmental psychiatric traits.
    Title: Tspyl2 Loss-of-Function Causes Neurodevelopmental Brain and Behavior Abnormalities in Mice.
  6. Following infection with T. gondii, myotubes but not myoblasts or fibroblasts further upregulate the negative cell cycle regulator Tspyl2.
    Title: Withdrawal of skeletal muscle cells from cell cycle progression triggers differentiation of Toxoplasma gondii towards the bradyzoite stage.
  7. We conclude that TSPYL2 contributes to cognitive variability through regulating the expression of Grin2a and Grin2b.
    Title: The nucleosome assembly protein TSPYL2 regulates the expression of NMDA receptor subunits GluN2A and GluN2B.
  8. CDA1 deletion reduces but does not block renal TGF-beta signaling.
    Title: Genetic deletion of cell division autoantigen 1 retards diabetes-associated renal injury.
  9. TSPYL2 serves a biological role in maintaining the G1 checkpoint under stress condition.
    Title: TSPYL2 is important for G1 checkpoint maintenance upon DNA damage.
  10. DENTT may play multiple roles in modulating transcriptional responses suggesting new roles for the TTSN superfamily during embryogenesis and differentiation.
    Title: Differentially expressed nucleolar TGF-beta1 target (DENTT) in mouse development.
Submit: New GeneRIF Correction See all GeneRIFs (12)

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • MGC40973

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables histone binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cell cycle IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within chromatin organization IEA
Inferred from Electronic Annotation
more info
  
involved_in negative regulation of DNA replication ISO
Inferred from Sequence Orthology
more info
  
involved_in negative regulation of cell growth ISO
Inferred from Sequence Orthology
more info
  
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of protein kinase activity ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
part_of chromatin IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
testis-specific Y-encoded-like protein 2
Names
CASK interacting nucleosome assembly protein
TSPY-like protein 2
cell division autoantigen 1 nucleolar protein
differentially expressed nucleolar TGF-beta1 target
nucleolar TGF-beta1 target protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001358369.1 → NP_001345298.1  testis-specific Y-encoded-like protein 2 isoform c

    Status: VALIDATED

    Source sequence(s)
    AL731727, AW046203
    Related
    ENSMUST00000138918.8
    Conserved Domains (1) summary
    pfam00956
    Location:209 → 388
    NAP; Nucleosome assembly protein (NAP)

  2. NM_029836.4 → NP_084112.1  testis-specific Y-encoded-like protein 2 isoform a

    See identical proteins and their annotated locations for NP_084112.1

    Status: VALIDATED

    Source sequence(s)
    AW046203, BC054393, BY008032, CJ066847
    Consensus CDS
    CCDS30474.1
    UniProtKB/Swiss-Prot
    Q6WRI3, Q7TQI8, Q9CU22
    Related
    ENSMUSP00000046782.7, ENSMUST00000044509.7
    Conserved Domains (1) summary
    cl08298
    Location:209 → 388
    NAP; Nucleosome assembly protein (NAP)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    151119847..151125480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_145936.3: Suppressed sequence

    Description
    NM_145936.3: This RefSeq was permanently suppressed because it is a nonsense-mediated decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7TQI8.1 GenPept UniProtKB/Swiss-Prot:Q7TQI8

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
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