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SUMO1P2 SUMO1 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 474337, updated on 10-Oct-2023

Summary

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Official Symbol
SUMO1P2provided by HGNC
Official Full Name
SUMO1 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:33149
See related
AllianceGenome:HGNC:33149
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
bA375F2.1
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Genomic context

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Location:
1q24.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (168898097..168899044)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (168253336..168254283)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (168867335..168868282)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 626 Neighboring gene uncharacterized LOC105371606 Neighboring gene long intergenic non-protein coding RNA 970 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2062 Neighboring gene MPRA-validated peak446 silencer Neighboring gene ribosomal protein L29 pseudogene 7 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2063 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2064 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2065 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2066 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2067 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2068 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:169021939-169022155 Neighboring gene RNA, 5S ribosomal pseudogene 66

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular features of human ubiquitin-like SUMO genes and their encoded proteins. Su HL, et al. Gene, 2002 Aug 21. PMID 12383504
  2. The ubiquitin-homology gene PIC1: characterization of mouse (Pic1) and human (UBL1) genes and pseudogenes. Howe K, et al. Genomics, 1998 Jan 1. PMID 9465300

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • SMT3 suppressor of mif two 3 homolog 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_004725.4 

    Range
    101..1048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    168898097..168899044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    168253336..168254283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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