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ASS1P9 argininosuccinate synthetase 1 pseudogene 9 [ Homo sapiens (human) ]

Gene ID: 454, updated on 10-Oct-2023

Summary

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Official Symbol
ASS1P9provided by HGNC
Official Full Name
argininosuccinate synthetase 1 pseudogene 9provided by HGNC
Primary source
HGNC:HGNC:772
See related
Ensembl:ENSG00000217791 AllianceGenome:HGNC:772
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ASSP9
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Genomic context

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Location:
5q11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (53859064..53860632)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (54686870..54688438)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (53154894..53156462)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900975 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16007 Neighboring gene MPRA-validated peak5241 silencer Neighboring gene long intergenic non-protein coding RNA 2105 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:53149739-53150938 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:53157616-53157824 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr5:53178032-53179231 Neighboring gene RNA, U6 small nuclear 272, pseudogene Neighboring gene ADP ribosylation factor like GTPase 15 Neighboring gene microRNA 581

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Hydrolysis of the hen egg vitelline membrane by cock sperm acrosin and other enzymes. Ho JJ, et al. J Exp Zool, 1975 Nov. PMID 454
  2. Amplification of human argininosuccinate synthetase pseudogenes. Nomiyama H, et al. J Mol Biol, 1986 Nov 20. PMID 2435915
  3. Human chromosomal assignments for 14 argininosuccinate synthetase pseudogenes: cloned DNAs as reagents for cytogenetic analysis. Su TS, et al. Am J Hum Genet, 1984 Sep. PMID 6093508, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • argininosuccinate synthetase pseudogene 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_003022.4 

    Range
    101..1669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    53859064..53860632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    54686870..54688438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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