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AY702102 cDNA sequence AY702102 [ Mus musculus (house mouse) ]

Gene ID: 446211, updated on 8-Feb-2024

Summary

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Official Symbol
AY702102provided by MGI
Official Full Name
cDNA sequence AY702102provided by MGI
Primary source
MGI:MGI:3525150
See related
Ensembl:ENSMUSG00000103935 AllianceGenome:MGI:3525150
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
STDP1
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Genomic context

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Location:
2 H3; 2 89.91 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (169803933..169805107, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (169962013..169963187, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene teashirt zinc finger family member 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:169520657-169520858 Neighboring gene predicted gene, 34344 Neighboring gene STARR-seq mESC enhancer starr_06492 Neighboring gene predicted gene, 54131 Neighboring gene STARR-seq mESC enhancer starr_06495 Neighboring gene STARR-seq mESC enhancer starr_06496 Neighboring gene STARR-seq mESC enhancer starr_06499 Neighboring gene STARR-seq mESC enhancer starr_06500 Neighboring gene STARR-seq mESC enhancer starr_06501 Neighboring gene STARR-seq mESC enhancer starr_06502 Neighboring gene STARR-seq mESC enhancer starr_06503 Neighboring gene RIKEN cDNA A630075F10 gene Neighboring gene STARR-positive B cell enhancer ABC_E6026 Neighboring gene zinc finger protein 217

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and integrative analysis of 28 novel genes specifically expressed and developmentally regulated in murine spermatogenic cells. Hong S, et al. J Biol Chem, 2005 Mar 4. PMID 15613475
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • round spermatids protein STDP1

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_131974.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL731822
    Related
    ENSMUST00000194651.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    169803933..169805107 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.