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RCN1P1 reticulocalbin 1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 442234, updated on 10-Oct-2023

Summary

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Official Symbol
RCN1P1provided by HGNC
Official Full Name
reticulocalbin 1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:39205
See related
AllianceGenome:HGNC:39205
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
6q14.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (87121416..87122813, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (88330143..88331540, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (87831134..87832531, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene RN7SK pseudogene 209 Neighboring gene glycoprotein hormones, alpha polypeptide Neighboring gene translation initiation factor IF-2-like Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24792 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:87861807-87862307 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24793 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24794 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:87866102-87866709 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:87878407-87878908 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:87878909-87879408 Neighboring gene zinc finger protein 292 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:87881659-87882500 Neighboring gene RNA polymerase I subunit F pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • reticulocalbin 1, EF-hand calcium binding domain pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022315.3 

    Range
    101..1498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    87121416..87122813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    88330143..88331540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases