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SLC25A51P1 SLC25A51 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 442229, updated on 10-Oct-2023

Summary

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Official Symbol
SLC25A51P1provided by HGNC
Official Full Name
SLC25A51 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:23325
See related
AllianceGenome:HGNC:23325
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MCART3P; bA707M13.1
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Genomic context

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Location:
6q12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (65787879..65789483)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (66940192..66941796)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (66497772..66499376)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene eyes shut homolog Neighboring gene uncharacterized LOC124901559 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92568 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92593 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92629 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92636 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92672 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92656 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92651 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92766 Neighboring gene Neanderthal introgressed variant-containing enhancers experimental_92772 and experimental_92778 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92831 Neighboring gene zinc finger CCCH-type containing 11C Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92928 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_92954 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:66278733-66279372 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93128 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93152 Neighboring gene H3K4me1 hESC enhancers GRCh37_chr6:66348122-66348622 and GRCh37_chr6:66348623-66349123 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93271 Neighboring gene Neanderthal introgressed variant-containing enhancers experimental_93370 and experimental_93383 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93446 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93466 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93494 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93502 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93582 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:66481227-66481728 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:66481729-66482228 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93679 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93689 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93713 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93741 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93781 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93800 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_93837 Neighboring gene NANOG hESC enhancer GRCh37_chr6:66681097-66681598 Neighboring gene uncharacterized LOC105377838 Neighboring gene ADH5 pseudogene 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Other Names

  • mitochondrial carrier triple repeat 3 pseudogene
  • solute carrier family 25 member 51 pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026540.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL391500, AW665607, BC024198

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    65787879..65789483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187555.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    13066..14670
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    66940192..66941796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_025947.1: Suppressed sequence

    Description
    NG_025947.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
Nucleotide Protein
Heading Accession and Version

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