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RPS17P5 ribosomal protein S17 pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 442216, updated on 10-Oct-2023

Summary

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Official Symbol
RPS17P5provided by HGNC
Official Full Name
ribosomal protein S17 pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:21352
See related
Ensembl:ENSG00000060303 AllianceGenome:HGNC:21352
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS17L4; dJ753D5.2; RPS17_4_700
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Genomic context

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See RPS17P5 in Genome Data Viewer
Location:
6p12.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (50857209..50857687, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (50699961..50700439, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (50824922..50825400, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375084 Neighboring gene uncharacterized LOC124901490 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:50791385-50791912 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:50791978-50792107 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50793064-50793564 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50793565-50794065 Neighboring gene transcription factor AP-2 beta Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:50810267-50810772 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50816733-50817234 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50817235-50817734 Neighboring gene TNPO3 pseudogene 2 Neighboring gene ferritin heavy chain 1 pseudogene 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcriptionally active human ribosomal protein S17 gene. Chen IT, et al. Gene, 1988 Oct 15. PMID 3240863
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • ribosomal protein S17-like 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005089.5 

    Range
    101..579
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    50857209..50857687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    50699961..50700439 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001013733.1: Suppressed sequence

    Description
    NM_001013733.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Chemical Information
Molecular Biology Databases