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MT1CP metallothionein 1C, pseudogene [ Homo sapiens (human) ]

Gene ID: 441771, updated on 10-Oct-2023

Summary

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Official Symbol
MT1CPprovided by HGNC
Official Full Name
metallothionein 1C, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:7395
See related
AllianceGenome:HGNC:7395
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
16q13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (56647689..56649513)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (62442668..62444492)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (56681601..56683425)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene metallothionein 1A Neighboring gene metallothionein 1D, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:56681377-56681944 Neighboring gene metallothionein 1B Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:56691221-56692194 Neighboring gene metallothionein 1F

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural and functional analysis of the human metallothionein-IA gene: differential induction by metal ions and glucocorticoids. Richards RI, et al. Cell, 1984 May. PMID 6327055
  2. Structure and tissue-specific expression of the human metallothionein IB gene. Heguy A, et al. Mol Cell Biol, 1986 Jun. PMID 3785191, Free PMC Article
  3. Human metallothionein genes are clustered on chromosome 16. Karin M, et al. Proc Natl Acad Sci U S A, 1984 Sep. PMID 6089206, Free PMC Article
  4. Human metallothionein genes: structure of the functional locus at 16q13. West AK, et al. Genomics, 1990 Nov. PMID 2286373

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005880.3 

    Range
    101..1925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    56647689..56649513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    62442668..62444492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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