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FAM90A13 family with sequence similarity 90 member A13 [ Homo sapiens (human) ]

Gene ID: 441314, updated on 3-Apr-2024

Summary

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Official Symbol
FAM90A13provided by HGNC
Official Full Name
family with sequence similarity 90 member A13provided by HGNC
Primary source
HGNC:HGNC:32261
See related
Ensembl:ENSG00000223885 MIM:613049; AllianceGenome:HGNC:32261
Gene type
protein coding
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM90A13P
Summary
FAM90A13 belongs to subfamily II of the primate-specific FAM90A gene family, which originated from multiple duplications and rearrangements (Bosch et al., 2007 [PubMed 17684299]). For background information on the FAM90A gene family, as well as information on the evolution of FAM90A genes, see FAM90A1 (MIM 613041).[supplied by OMIM, Oct 2009]
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Genomic context

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Location:
8p23.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (7279770..7282780)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (11739022..11742032)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (7135632..7140864)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 90 member A3 Neighboring gene uncharacterized LOC124901877 Neighboring gene family with sequence similarity 90, member A4 Neighboring gene family with sequence similarity 90 member A5 Neighboring gene family with sequence similarity 90 member A20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the multi-copy gene family FAM90A as a copy number variant in different ethnic backgrounds. Bosch N, et al. Gene, 2008 Sep 1. PMID 18602769
  2. Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. Bosch N, et al. Hum Mol Genet, 2007 Nov 1. PMID 17684299
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Clone Names

  • FLJ37516

General protein information

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Preferred Names
protein FAM90A13
Names
family with sequence similarity 90 member A13, pseudogene
putative protein FAM90A13
putative protein FAM90A13P

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423526.1 → NP_001410455.1  protein FAM90A13

    Status: INFERRED

    Source sequence(s)
    AF228730
    UniProtKB/Swiss-Prot
    P0C7W8
    Related
    ENSP00000514263.1, ENST00000534703.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    7279770..7282780
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    11739022..11742032
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_032076.2: Suppressed sequence

    Description
    NG_032076.2: This RefSeq was removed because it is now thought that this gene does encode a protein.

  2. NM_001164456.1: Suppressed sequence

    Description
    NM_001164456.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0C7W8.1 GenPept UniProtKB/Swiss-Prot:P0C7W8

Gene LinkOut

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Chemical Information
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