RIMBP3B RIMS binding protein 3B [Homo sapiens (human)] - Gene

Summary

Official Symbol: RIMBP3Bprovided by HGNC
Official Full Name: RIMS binding protein 3Bprovided by HGNC
Primary source: HGNC:HGNC:33891
See related: Ensembl:ENSG00000274600 MIM:612700; AllianceGenome:HGNC:33891
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: RIMBP3.2; RIM-BP3.2; RIM-BP3.B
Summary: Predicted to enable benzodiazepine receptor binding activity. Predicted to be involved in fertilization and spermatid development. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Predicted to colocalize with manchette. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: 22q11.21

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2023_10	current	GRCh38.p14 (GCF_000001405.40)	22	NC_000022.11 (21383751..21389478)
RS_2023_10	current	T2T-CHM13v2.0 (GCF_009914755.1)	22	NC_060946.1 (21958834..21964558, complement)
105.20220307	previous assembly	GRCh37.p13 (GCF_000001405.25)	22	NC_000022.10 (21738040..21743767)

Chromosome 22 - NC_000022.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Gene Ontology Provided by GOA

Function	Evidence Code	Pubs
enables benzodiazepine receptor binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in fertilization	IBA Inferred from Biological aspect of Ancestor more info
NOT involved_in neuromuscular synaptic transmission	IBA Inferred from Biological aspect of Ancestor more info
involved_in spermatid development	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
colocalizes_with manchette	IBA Inferred from Biological aspect of Ancestor more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: RIMS-binding protein 3B

Names: RIMS binding protein 3.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001128635.2 → NP_001122107.1 RIMS-binding protein 3B

See identical proteins and their annotated locations for NP_001122107.1

Status: VALIDATED

Source sequence(s)

AP000552

Consensus CDS

CCDS46668.1

UniProtKB/Swiss-Prot

A6NNM3

Related

ENSP00000479326.1, ENST00000620804.2

Conserved Domains (6) summary

cd11851
Location:1573 → 1633

SH3_RIM-BP; Src homology 3 domains of Rab3-interacting molecules (RIMs) binding proteins

cd12014
Location:836 → 895

SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins

pfam00041
Location:995 → 1056

fn3; Fibronectin type III domain

cd16269
Location:106 → 117

GBP_C; coiled coil [structural motif]

cl17036
Location:1456 → 1517

SH3; Src Homology 3 domain superfamily

cl20817
Location:75 → 139

GBP_C; Guanylate-binding protein, C-terminal domain