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Gm5645 predicted pseudogene 5645 [ Mus musculus (house mouse) ]

Gene ID: 434874, updated on 8-Feb-2024

Summary

Official Symbol
Gm5645provided by MGI
Official Full Name
predicted pseudogene 5645provided by MGI
Primary source
MGI:MGI:3643221
See related
AllianceGenome:MGI:3643221
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG434874
Expression
Restricted expression toward testis adult (RPKM 17.2) See more
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Genomic context

Location:
X F3; X 72.38 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (152913832..152918446, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (154130836..154135450, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted pseudogene 5947 Neighboring gene spermatogenesis associated multipass transmembrane protein 1d Neighboring gene predicted pseudogene 16445 Neighboring gene predicted gene 6620

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
uncharacterized protein LOC434874

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001382392.1NP_001369321.1  uncharacterized protein LOC434874

    Status: VALIDATED

    Source sequence(s)
    BX005465

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    152913832..152918446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)