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Gm5493 predicted gene 5493 [ Mus musculus (house mouse) ]

Gene ID: 433078, updated on 8-Feb-2024

Summary

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Official Symbol
Gm5493provided by MGI
Official Full Name
predicted gene 5493provided by MGI
Primary source
MGI:MGI:3644511
See related
AllianceGenome:MGI:3644511
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG433078
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Genomic context

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Location:
17; 17 A3.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (22958913..22972647)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (22739940..22753674)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 945 pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E11629 Neighboring gene STARR-seq mESC enhancer starr_42043 Neighboring gene endosulfine alpha pseudogene Neighboring gene STARR-seq mESC enhancer starr_42044 Neighboring gene zinc finger protein 946 pseudogene Neighboring gene zinc finger protein 945 Neighboring gene STARR-positive B cell enhancer ABC_E7496 Neighboring gene predicted gene, 32892

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    22958913..22972647
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003952380.1 RNA Sequence

  2. XR_004939688.1 RNA Sequence

  3. XR_003952381.1 RNA Sequence

  4. XR_003952379.2 RNA Sequence

Nucleotide Protein Strain
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