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Vmn2r96 vomeronasal 2, receptor 96 [ Mus musculus (house mouse) ]

Gene ID: 433070, updated on 11-Apr-2024

Summary

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Official Symbol
Vmn2r96provided by MGI
Official Full Name
vomeronasal 2, receptor 96provided by MGI
Primary source
MGI:MGI:3644514
See related
Ensembl:ENSMUSG00000091679 AllianceGenome:MGI:3644514
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG433070
Summary
Predicted to enable G protein-coupled receptor activity. Predicted to be integral component of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Vmn2r96 in Genome Data Viewer
Location:
17 A3.2; 17 11.4 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (18793282..18818419)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (18573255..18598157)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_41977 Neighboring gene vomeronasal 2, receptor 95 Neighboring gene vomeronasal 2, receptor, pseudogene 114 Neighboring gene STARR-seq mESC enhancer starr_41979 Neighboring gene STARR-seq mESC enhancer starr_41980 Neighboring gene STARR-seq mESC enhancer starr_41981 Neighboring gene STARR-seq mESC enhancer starr_41982 Neighboring gene vomeronasal 2, receptor, pseudogene 115 Neighboring gene STARR-seq mESC enhancer starr_41983 Neighboring gene vomeronasal 2, receptor, pseudogene 116

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Young JM, et al. Trends Genet, 2007 May. PMID 17382427
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
vomeronasal 2, receptor 96
Names
vomeronasal receptor Vmn2r96

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001385081.1 → NP_001372010.1  vomeronasal 2, receptor 96 precursor

    Status: VALIDATED

    Source sequence(s)
    AC151987
    Consensus CDS
    CCDS49974.1
    UniProtKB/TrEMBL
    E9PZU5, K7N6Z2
    Related
    ENSMUSP00000135095.3, ENSMUST00000177244.4
    Conserved Domains (3) summary
    cd15283
    Location:582 → 833
    7tmC_V2R_pheromone; vomeronasal type-2 pheromone receptors, member of the class C family of seven-transmembrane G protein-coupled receptors
    cd06365
    Location:42 → 501
    PBP1_pheromone_receptor; Ligand-binding domain of the V2R pheromone receptor, a member of the family C receptors within the G-protein coupled receptor superfamily
    pfam07562
    Location:509 → 562
    NCD3G; Nine Cysteines Domain of family 3 GPCR

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    18793282..18818419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001104547.1: Suppressed sequence

    Description
    NM_001104547.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein
Heading Accession and Version

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