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MIR133A2 microRNA 133a-2 [ Homo sapiens (human) ]

Gene ID: 406923, updated on 10-Oct-2023

Summary

Official Symbol
MIR133A2provided by HGNC
Official Full Name
microRNA 133a-2provided by HGNC
Primary source
HGNC:HGNC:31518
See related
Ensembl:ENSG00000284508 MIM:610255; miRBase:MI0000451; AllianceGenome:HGNC:31518
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MIRN133A2; mir-133a-2
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

Location:
20q13.33
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (62564912..62565013)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (64363437..64363538)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (61162119..61162220)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene cardiomyocyte maturation associated lncRNA Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:61147747-61148622 Neighboring gene MIR1-1 host gene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:61153927-61154798 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:61155669-61156540 Neighboring gene microRNA 1-1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:61158329-61158846 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:61158847-61159365 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:61159366-61159883 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:61166511-61167012 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13113 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18205 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:61172911-61173412 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:61173413-61173912 Neighboring gene ribosomal protein L7 pseudogene 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:61175357-61176308 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:61186037-61186544 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:61188976-61189476 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:61189477-61189977 Neighboring gene long intergenic non-protein coding RNA 2970

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array.
EBI GWAS Catalog

Pathways from PubChem

General gene information

Other Names

  • hsa-mir-133a-2

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of RISC complex IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_029676.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL449263
    Related
    ENST00000347538.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    62564912..62565013
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    64363437..64363538
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)