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MTCO3P1 MT-CO3 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 404026, updated on 10-Oct-2023

Summary

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Official Symbol
MTCO3P1provided by HGNC
Official Full Name
MT-CO3 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:31342
See related
AllianceGenome:HGNC:31342
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U92032.1
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Genomic context

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Location:
6p21.32
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (32706144..32706803, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (32528722..32529382, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (32673921..32674580, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene HLA-DQA1 antisense RNA 1 Neighboring gene major histocompatibility complex, class II, DQ alpha 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:32623606-32624294 Neighboring gene HLA-DQB1 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:32632197-32632724 Neighboring gene major histocompatibility complex, class II, DQ beta 1 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 6:32682862 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 6:32685380 Neighboring gene uncharacterized LOC102725019 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 6:32698988 Neighboring gene major histocompatibility complex, class II, DQ alpha 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • MTCO3 pseudogene 1
  • cytochrome c oxidase III pseudogene 1
  • mitochondrially encoded cytochrome c oxidase III pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_027900.1 

    Range
    101..760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    32706144..32706803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    32528722..32529382 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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