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BPIFB9P BPI fold containing family B member 9, pseudogene [ Homo sapiens (human) ]

Gene ID: 402016, updated on 10-Oct-2023

Summary

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Official Symbol
BPIFB9Pprovided by HGNC
Official Full Name
BPI fold containing family B member 9, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:16109
See related
Ensembl:ENSG00000125997 AllianceGenome:HGNC:16109
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C20orf115; dJ1187J4.2; dJ1187J4.3
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Genomic context

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Location:
20q11.21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (33347120..33355044)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (35074329..35082251)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (31934926..31942850)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene BPI fold containing family B member 1 Neighboring gene uncharacterized LOC124904888 Neighboring gene uncharacterized LOC105372594 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:31899476-31899976 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:31899977-31900477 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:31909477-31909976 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:31911786-31912403 Neighboring gene BPI fold containing family B member 5, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17728 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:31934530-31935364 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:31937032-31937864 Neighboring gene CDK5 regulatory subunit associated protein 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17729 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17730 Neighboring gene uncharacterized LOC124904889 Neighboring gene syntrophin alpha 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Distant cousins: genomic and sequence diversity within the BPI fold-containing (BPIF)/PLUNC protein family. Bingle CD, et al. Biochem Soc Trans, 2011 Aug. PMID 21787330
  2. Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. Bingle CD, et al. Biochem Soc Trans, 2011 Aug. PMID 21787333, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_029803.1 

    Range
    101..8025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    33347120..33355044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    35074329..35082251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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