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VDAC2P3 VDAC2 pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 401959, updated on 10-Oct-2023

Summary

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Official Symbol
VDAC2P3provided by HGNC
Official Full Name
VDAC2 pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:51931
See related
AllianceGenome:HGNC:51931
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
1p12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (117640340..117641727, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (117649547..117650934, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (118182962..118184349, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene TENT5C divergent transcript Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:118147484-118147984 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:118147985-118148485 Neighboring gene terminal nucleotidyltransferase 5C Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:118172930-118173480 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:118173481-118174031 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1243 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1583 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1584 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1585 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1586 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1587 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1588 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:118241179-118241354 Neighboring gene NANOG hESC enhancer GRCh37_chr1:118241403-118241982 Neighboring gene anaphase promoting complex subunit 13 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping of the human Voltage-Dependent Anion Channel isoforms 1 and 2 reconsidered. Messina A, et al. Biochem Biophys Res Commun, 1999 Feb 24. PMID 10049775

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • voltage dependent anion channel 2 pseudogene 3

Clone Names

  • FLJ20202

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021270.2 

    Range
    101..1488
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    117640340..117641727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    117649547..117650934 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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