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ATXN7L3P1 ATXN7L3 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 392485, updated on 10-Oct-2023

Summary

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Official Symbol
ATXN7L3P1provided by HGNC
Official Full Name
ATXN7L3 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:54980
See related
Ensembl:ENSG00000215168 AllianceGenome:HGNC:54980
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See ATXN7L3P1 in Genome Data Viewer
Location:
Xq12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (66055390..66056640, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (64482597..64483847, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (65275232..65276482, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene MIR223 host gene Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chrX:65252367-65253566 Neighboring gene microRNA 223 Neighboring gene V-set and immunoglobulin domain containing 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29721 Neighboring gene Sharpr-MPRA regulatory region 4431 Neighboring gene eukaryotic translation initiation factor 4B pseudogene 9 Neighboring gene hephaestin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • ataxin 7 like 3 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022608.2 

    Range
    101..1351
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    66055390..66056640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    64482597..64483847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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