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SRSF2P1 SRSF2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 392439, updated on 10-Oct-2023

Summary

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Official Symbol
SRSF2P1provided by HGNC
Official Full Name
SRSF2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:54922
See related
Ensembl:ENSG00000236072 AllianceGenome:HGNC:54922
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
Xp21.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (34387722..34388437)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (33986564..33987279)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (34405839..34406554)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:34165078-34165618 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:34165632-34165795 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:34175554-34176054 Neighboring gene ferritin heavy chain 1 pseudogene 14 Neighboring gene uncharacterized LOC107985674 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:34499547-34500046 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:34575763-34576344 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:34577375-34577902 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:34577903-34578428 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:34578429-34578954 Neighboring gene NANOG hESC enhancer GRCh37_chrX:34611791-34612292 Neighboring gene transmembrane protein 47 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:34782794-34783536 Neighboring gene family with sequence similarity 47 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022653.1 

    Range
    101..816
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    34387722..34388437
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    33986564..33987279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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