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MAP1LC3BP1 microtubule associated protein 1 light chain 3 beta pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 392288, updated on 10-Oct-2023

Summary

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Official Symbol
MAP1LC3BP1provided by HGNC
Official Full Name
microtubule associated protein 1 light chain 3 beta pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:49783
See related
Ensembl:ENSG00000231909 AllianceGenome:HGNC:49783
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
9p22.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (19460926..19463389, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (19473663..19476127, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancers GRCh37_chr9:19407977-19408834 and GRCh37_chr9:19408835-19409690 Neighboring gene NADH:ubiquinone oxidoreductase subunit A5 pseudogene 3 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:19446057-19447256 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28222 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:19457239-19457834 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:19460877-19461378 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19795 Neighboring gene uncharacterized LOC105375988 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:19492981-19493504 Neighboring gene alkaline ceramidase 2 Neighboring gene solute carrier family 24 member 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28224 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:19698798-19699484 Neighboring gene C11orf98 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

General gene information

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Markers

General protein information

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Preferred Names
microtubule-associated proteins 1A/1B light chain 3B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    19460926..19463389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047424278.1 → XP_047280234.1  microtubule-associated proteins 1A/1B light chain 3B-like

    Related
    ENST00000417653.2

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    19473663..19476127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047445478.1 → XP_047301434.1  microtubule-associated proteins 1A/1B light chain 3B-like

Nucleotide Protein
Heading Accession and Version

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