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RPSAP31 ribosomal protein SA pseudogene 31 [ Homo sapiens (human) ]

Gene ID: 391598, updated on 10-Oct-2023

Summary

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Official Symbol
RPSAP31provided by HGNC
Official Full Name
ribosomal protein SA pseudogene 31provided by HGNC
Primary source
HGNC:HGNC:35558
See related
Ensembl:ENSG00000234371 AllianceGenome:HGNC:35558
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPSA_11_442
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Genomic context

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Location:
3q27.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (183887522..183888537)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (186697247..186698262)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (183605310..183606325)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene presenilin associated rhomboid like Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14951 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:183602698-183602848 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20898 Neighboring gene microRNA 4448 Neighboring gene cytochrome P450 family 2 subfamily AB member 1, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:183626615-183627116 Neighboring gene ATP binding cassette subfamily C member 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20899 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:183707861-183708361 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14952 Neighboring gene uncharacterized LOC124909468 Neighboring gene ABCC5 antisense RNA 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010907.1 

    Range
    101..1116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    183887522..183888537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    186697247..186698262
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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