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KRT18P35 keratin 18 pseudogene 35 [ Homo sapiens (human) ]

Gene ID: 391584, updated on 10-Oct-2023

Summary

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Official Symbol
KRT18P35provided by HGNC
Official Full Name
keratin 18 pseudogene 35provided by HGNC
Primary source
HGNC:HGNC:33404
See related
Ensembl:ENSG00000215606 AllianceGenome:HGNC:33404
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3q23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (141470566..141471950, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (144218231..144219615, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (141189408..141190792, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124909441 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20622 Neighboring gene PHF5A pseudogene 7 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20623 Neighboring gene zinc finger and BTB domain containing 38 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:141086748-141087947 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20625 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:141092856-141093449 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20626 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20627 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20628 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20629 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14774 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20630 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:141111788-141112397 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:141112398-141113008 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14775 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14776 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20631 Neighboring gene uncharacterized LOC124906291 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:141170008-141170180 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20632 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:141174421-141175063 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14777 Neighboring gene RAS p21 protein activator 2 Neighboring gene putative uncharacterized protein MSANTD5 Neighboring gene RASA2 intronic transcript 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009721.2 

    Range
    101..1485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    141470566..141471950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    144218231..144219615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases