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PPIAP47 peptidylprolyl isomerase A pseudogene 47 [ Homo sapiens (human) ]

Gene ID: 391532, updated on 10-Oct-2023

Summary

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Official Symbol
PPIAP47provided by HGNC
Official Full Name
peptidylprolyl isomerase A pseudogene 47provided by HGNC
Primary source
HGNC:HGNC:53671
See related
AllianceGenome:HGNC:53671
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
15q24.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (75746727..75747439)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (73617458..73618170)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (76039068..76039780)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75966659-75967446 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75974798-75975642 Neighboring gene chondroitin sulfate proteoglycan 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75978522-75979027 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75979028-75979532 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75985202-75985952 Neighboring gene Sharpr-MPRA regulatory region 4583 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9862 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75989701-75990450 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75990451-75991198 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6678 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6679 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:75993083-75993582 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:75993590-75994515 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9863 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:76019661-76020161 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:76023672-76024603 Neighboring gene ciliary microtubule associated protein 1C Neighboring gene dynamin 1 pseudogene 35 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:76028296-76028816 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6680 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6681 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9864 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:76043715-76044276 Neighboring gene uncharacterized LOC101929408 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:76058121-76058620 Neighboring gene microRNA 4313 Neighboring gene golgin A6 family member E, pseudogene Neighboring gene RNA, 7SL, cytoplasmic 319, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • peptidylprolyl isomerase A (cyclophilin A) pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030235.2 

    Range
    101..813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    75746727..75747439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    73617458..73618170
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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