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RPL23AP38 ribosomal protein L23a pseudogene 38 [ Homo sapiens (human) ]

Gene ID: 391504, updated on 10-Oct-2023

Summary

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Official Symbol
RPL23AP38provided by HGNC
Official Full Name
ribosomal protein L23a pseudogene 38provided by HGNC
Primary source
HGNC:HGNC:36351
See related
AllianceGenome:HGNC:36351
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL23A_11_340
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Genomic context

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See RPL23AP38 in Genome Data Viewer
Location:
3p26.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (1595537..1596257, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (1589724..1590444, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (1637221..1637941, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene contactin 6 Neighboring gene uncharacterized LOC105376923 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:1277185-1278384 Neighboring gene crumbs cell polarity complex component 3 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:1642422-1642922 Neighboring gene meiotic recombination hotspot S Neighboring gene Sharpr-MPRA regulatory region 9777 Neighboring gene ribosomal protein L23a pseudogene 39 Neighboring gene ribosomal protein L21 pseudogene 17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010432.2 

    Range
    101..821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    1595537..1596257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    1589724..1590444 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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