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RPS12P4 ribosomal protein S12 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 391370, updated on 10-Oct-2023

Summary

Official Symbol
RPS12P4provided by HGNC
Official Full Name
ribosomal protein S12 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:35670
See related
AllianceGenome:HGNC:35670
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS12_1_210
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Genomic context

See RPS12P4 in Genome Data Viewer
Location:
2p21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (41850181..41850683, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (41855684..41856186, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (42077321..42077823, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374506 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15620 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15621 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15622 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15623 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:41936889-41938088 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15624 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:41949350-41950549 Neighboring gene MPRA-validated peak3673 silencer Neighboring gene lactate dehydrogenase A pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11389 Neighboring gene MPRA-validated peak3674 silencer Neighboring gene RNA, U4 small nuclear 63, pseudogene Neighboring gene long intergenic non-protein coding RNA 1913

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
A genome-wide association study suggests contrasting associations in ACPA-positive versus ACPA-negative rheumatoid arthritis.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011048.1 

    Range
    101..603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    41850181..41850683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    41855684..41856186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)