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RPS15AP34 ribosomal protein S15a pseudogene 34 [ Homo sapiens (human) ]

Gene ID: 390735, updated on 10-Oct-2023

Summary

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Official Symbol
RPS15AP34provided by HGNC
Official Full Name
ribosomal protein S15a pseudogene 34provided by HGNC
Primary source
HGNC:HGNC:35609
See related
Ensembl:ENSG00000241808 AllianceGenome:HGNC:35609
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS15A_22_1489
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Genomic context

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Location:
16q21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (63350759..63351148, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (69138795..69139184, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (63384663..63385052, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371307 Neighboring gene uncharacterized LOC105371308 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:63153709-63154210 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:63154211-63154710 Neighboring gene UBE2F pseudogene 2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:63422293-63422896 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:63547840-63547987 Neighboring gene NANOG hESC enhancer GRCh37_chr16:63685874-63686502 Neighboring gene MPRA-validated peak2614 silencer Neighboring gene long intergenic non-protein coding RNA 2165 Neighboring gene uncharacterized LOC105371309

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence of the human genome. Venter JC, et al. Science, 2001 Feb 16. PMID 11181995
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010426.1 

    Range
    101..490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    63350759..63351148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    69138795..69139184 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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