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CLIC1P1 chloride intracellular channel 1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 390363, updated on 10-Oct-2023

Summary

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Official Symbol
CLIC1P1provided by HGNC
Official Full Name
chloride intracellular channel 1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:32691
See related
AllianceGenome:HGNC:32691
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
12q24.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (120914392..120915323)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (120903486..120904417)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (121352195..121353126)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene signal peptide peptidase like 3 Neighboring gene ADP ribosylation factor 1 pseudogene 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4967 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4968 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4969 Neighboring gene uncharacterized LOC105500240 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7151 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:121362870-121364069 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:121364035-121364584 Neighboring gene ribosomal protein L12 pseudogene 33 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:121366435-121367242 Neighboring gene HNF1A antisense RNA 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021736.2 

    Range
    101..1032
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    120914392..120915323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    120903486..120904417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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